Service Rates

Genomics/Bioinformatics Seminar being offered in September 2024

Sept 27, 2024 - So you want to do a: PacBio RNAseq Experiment

 

All requests must be submitted via iLabs. Please read before submitting a request:

  • You've read the submission instructions for Illumina, or PacBio and each request is for a single tube submission.
  • Quantity refers to the number of lanes for Illumina or the number of cells for PacBio.
  • You must specify run parameters for custom Illumina runs (cycle for Read1, Index1, Index2, Read2), likewise the submission should include a full flow cell.
  • The current sample status can be tracked on the CAT queue.

 

NovaSeq X Plus
Flow Cell/lanes Reads/lane Cycle kit

UC(Internal) or Affiliate

 External not for profit External for profit

25B

(8 lanes)

 3.25B 100 cycles Coming Nov. 2024 Coming Nov. 2024 Coming Nov. 2024
200 cycles Coming Nov. 2024 Coming Nov. 2024 Coming Nov. 2024
300 cycles $2,850 $3,591 $4,448

10B

(8 lanes)

 1.25B 100 cycles $1,252 $1,578 $1,972
200 cycles $1,674 $2,110 $2,637
300 cycles $1,724 $2,173 $2,715

1.5B

(2 lanes)

 0.75B 100 cycles $1,824 $2,299 $2,873
200 cycles $2,357 $2,970 $3,712
300 cycles $2,582 $3,254 $4,067
NovaSeq 6000
Flow Cell/lanes Reads/lane Cycle kit UC(Internal)/Affiliate External not for profit External for profit

S4

(4 lanes)

 2.5B 35 cycles $4,605 $5,802 $7,252
200 cycles $5,165 $6,508 $8,135
300 cycles $5,778 $7,281 $9,101

S2

(2 lanes)

 2.1B 100 cycles $5,440 $6,854 $8,567
200 cycles $6,989 $8,807 $11,008
300 cycles $7,757 $9,774 $12,217

S1

(2 lanes)

 800M 100 cycles $3,009 $3,792 $4,739
200 cycles $3,722 $4,691 $5,863
300 cycles $4,238 $5,341 $6,675

SP

(2 lanes)

 400M 100 cycles $1,924 $2,425 $3,030
200 cycles $2,457 $3,096 $3,870
300 cycles $2,682 $3,380 $4,224
500 cycles $3,548 $4,470 $5,587
PacBio Revio
SMRT Cell Reads/cell Movie Acquisition Time

UC(Internal) or Affiliate

 External not for profit External for profit

1 SMRT Cell

 6-10M 12, 24, 30 hours $1,625 $2,048 $2,559

Referencing the CAT Core and Publications

When submitting manuscripts, please acknowledge the CAT by including the text: “Sequencing was performed at the UCSF CAT, supported by UCSF PBBR, RRP IMIA, and NIH 1S10OD028511-01 grants.” 

 

To aid our facility in future grant submissions, it helps to reference labs and publications that have benefited from our core please notify us of your achievement by emailing catcore [at] ucsf.edu the PMID number, lab, and the piece of equipment used in the paper.