Bioinformatics Workshops Survey

The UCSF CAT Core has started providing Bioinformatic Workshops to the genomics community. These workshops will be similar in style to those that Dr. Matt Settles organized at UC Davis. Please consider filling out this survey to help target the UCSF community's needs.

What type of workshop would best meet your needs
The length of course depends on the workshop; however, understanding the time commitment people are willing to give. Select all that apply.
Would it be preferential to have the workshop not be over consecutive days? For example, a 3-day workshop could be Mon,Wed,Fri of the same week. Or on Mondays for 3 weeks.
Venders often supply lunch in exchange for a chance to talk in front of the workshop. Are you ok with this?
Significant InterestNeutralNo Interest
Introduction to Command Line for Bioinformatics (Basics) *
Introduction to R for Bioinformatics (Basics) *
Intermediate R for Bioinformatics (Intermediate) *
Adv. Plotting and Reports in R (Advanced) *
Bioinformatic Statistical Analysis in R (Advanced) *
Introduction to Python for Bioinformatics (Intermediate) *
Intermediate Python for Bioinformatics (Intermediate) *
Introduction to building workflows for Bioinformatics (Nextflow) *
Introduction to Differential Expression Analysis (Illumina) *
Introduction to Differential Expression Analysis (PacBio) *
Introduction to Single Cell Analysis (10X Genomics) *
Introduction to Single Cell Analysis (Non-specific) *
Introduction to Whole Genome Sequencing and Variant Analysis (Illumina) *
Introduction to Whole Genome Sequencing and Variant Analysis (PacBio) *
Introduction to Microbial Community Analysis [Amplicons] (Illumina) *
Introduction to Microbial Community Analysis [Amplicons] (PacBio) *
Introduction to Microbial Community Analysis [Metagenomics] (Illumina) *
Introduction to Microbial Community Analysis [Metagenomics] (PacBio) *
Crispr Functional Genomics (Illumina) *
Any additional comments, suggestions, or thoughts?

Thank you for filling this out, it really helps to target the UCSF and Beyond Community and offer help in those areas that are the greatest need.

Matt Settles

Referencing the CAT Core and Publications

 

When submitting manuscripts, please acknowledge the CAT by including the text: “Sequencing was performed at the UCSF CAT, supported by UCSF PBBR, RRP IMIA, and NIH 1S10OD028511-01 grants.” 

 

To aid our facility in future grant submissions, it helps to reference labs and publications that have benefited from our core please notify us of your achievement by emailing catcore [at] ucsf.edu the PMID number, lab, and the piece of equipment used in the paper.